CDS
Accession Number | TCMCG057C00741 |
gbkey | CDS |
Protein Id | XP_018492489.1 |
Location | join(3144633..3144791,3144935..3145000,3145119..3145178,3145276..3145371,3145764..3145924,3146064..3146152,3146228..3146445,3146879..3146965,3147049..3147183,3147684..3147806,3147917..3148000,3148284..3148448,3148538..3148714,3148847..3148960,3149369..3149473,3149637..3149755,3149834..3149978,3150057..3150151,3150310..3150415,3150499..3150578,3150680..3150856,3150992..3151076,3151221..3151301,3151385..3151528,3152115..3152210,3152335..3152535,3152706..3152769,3152851..3153005,3153073..3153473,3153625..3153754,3153835..3154032,3154110..3154184,3154892..3155082,3155329..3155509,3155598..3155662,3155942..3156074,3156200..3156301,3156388..3156471,3156668..3156742,3156842..3156901,3156978..3157240,3157323..3157371,3157642..3157802,3157902..3157968,3158370..3158474,3158588..3158707,3158785..3158973,3159184..3159290,3159719..3160118) |
Gene | LOC108862749 |
GeneID | 108862749 |
Organism | Raphanus sativus |
Protein
Length | 2180aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA344915 |
db_source | XM_018636987.1 |
Definition | PREDICTED: DNA polymerase epsilon catalytic subunit A [Raphanus sativus] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGAGCGGAGATAATCGAAGATGGGATCGAAAGGACTCGCGGAGATCGAATAAGCAGAAGGTCGTGAAAACGGCGGAAGACGAACTCGAATCTAAACTCGGATTTGGGCTTTTCTCCGAAGGTGAAACGCGCCTCGGGTGGCTACTCACATTCGCATCATCATCTTGGGAAGATCCTGATACTGGGAAAACTTATAGCTGTGTGGACCTTTACTTCGTTACTCAGGACGGGTTTTATTTCAAGACAAAATACAAGTTCCGGCCTTACTTCTATGCAGCGACGAAAGATAAAATGGAATTGGAAGTTGAAGCCTACTTAAGACGCCGATATGAAAGACAAGTTGCTGATATTGAGATTGTTGAAAAAGAGGATCTTGATCTTAAAAATCATCTATCTGGCCTGCGAAAGAAATACCTAAAAGTATCATTTGATACTGTGCAACAATTAATGGAAGTCAAGAGGGATCTATCGCATGTTGTCGAACGAAACCAGGCAAAATTTGACGCACTTGAAGCATACGAATCCATTTTGGCTGGAAAACGAGAACAACGTCTTCAAGATTGCTTAGACTCTTTAGTGGACCTCCGCGAGTACGATGTTCCTTATCATGTTCGATTTGCAGTTGATAAAGATGTGCGGAGTGGGCAATGGTACAATGTCAGTATTTCCAGCACTGATGTCACACTAGAGAAGAGGACAGATATTCTCCAGCGCGCAGAAGTCCGTGTATGTGCATTCGATATAGAGACAACAAAGCTTGAGTTGAAGTTTCCGGATGCTGAATATGATCAAATTATGATGATATCTTACATGGTCGATGGGCAAGGTTTTCTAATTGTTAACAGAGAGTGTGTTGGCGAAGACATAGAAGATCTGGAGTATACACCCAAACCAGAGTTTGAAGGATATTTCAAAGTCACTAACGTTAGCAACGAGGTTGAACTCCTTCGAAAATGGTTTTCCCATATGCAAGAGGTTAAACCCGGTATTTATGTTACATATAACGGCGACTTTTTCGACTGGCCATTTATAGAACGGAGAGCAGCCCATCATGAGATCAAAATGAATGAGGAGTTGGGATTCCGTTGTGATCAGAATCAAGGTGAATGTCGAGCTAAATTCGTTTGCCATTTAGATTGTTTTGCTTGGGTGAAACGAGATAGCTATCTTCCTCAGGGAAGCCATGGTCTGAAGGCTGTTACAAAGGCTAAACTGGGGTATGATCCACTGGAAGTGAACCCAGAAGACATGGTTCAGTTTGCCATGGAAAAACCACAGACAATGGCCTCCTATTCGGTCTCTGATGCTGTTGCAACTTATTACCTATACATGACATATGTTCATCCGTTCATTTTCTCTCTCGCAACTATCATTCCAATGGTCCCTGATGAGGTCTTACGTAAAGGAAGTGGAACCCTTTGTGAAATGCTTCTGATGGTCGAGGCGTATAAGGCAAATGTTGTATGTCCCAATAAAAACCAAGCTGACCCTGAGAAGTTCTACCAAAGTCACCTTCTTGAAAGTGAGACATATATTGGGGGCCATGTAGAGTGCCTCGAAAGTGGTGTTTTCCGTTCTGACATTCCAACCAGTTTTAAGCTAGACACATCAGCATACCAGCAACTGATCGATAACCTTGACCGGGATCTGGAGTATGCTATCACTGTAGAAGGGAAAATGAGAATGGATTCCGTTTCCAACTATGATGAAGTGAAGGAAAAAATCAAGGAAAAGCTGGAGAAGTTACGAGATTGCCCTATACGTGAAGAGGGACCTCTTATTTATCACCTTGATGTTGCAGCGATGTATCCAAATATCATCTTAACAAATAGGCTTCAGCCACCATCAATAGTTACGAATGAAATTTGCACCGCATGTGATTTCAACCGCCCGGGAAAAACGTGTCTTCGAAAACTTGAATGGGTTTGGCGTGGGGTGACATTCATGGCAAAGAAAAGTGATTATTACCATTTGAAGAAGCAGATTGAGTCCGAATTTGTTGATGCTGGTGCAAATATTCAGTCTTCAAAATCATTCCTTGATCTACCAAAGGTGGAACAACAATCTAAACTAAAAGAAAGACTGAAAAAATATTGTCAAAAGGCATATCGACGAGTACTTGACAAGCCAATCACTGAAGTTCGTGAGGCTGGGATATGCATGAGAGAAAACCCGTTTTATGTAGACACTGTTCGAAGCTTTCGAGATAGGAGATATGAATACAAAACACTTAACAAGGTCTGGAAGGGAAAGTTGTCAGAGGCCAAGGCAAGTGGCAATTCAATCAAGATCCAGGAAGCACAGGACATGGTAGTGGTTTACGATTCCTTGCAGCTAGCTCATAAGTGTATTCTTAATTCCTTCTATGGATATGTCATGCGAAAGGGTGCAAGATGGTACTCTATGGAAATGGCTGGTGTAGTTACCTATACTGGAGCCAAAATCATCCAGAATGCCCGTTTGCTTATTGAGCGTATTGGGAGACCACTTGAGCTGGATACAGATGGTATATGGTGTTGTCTTCCTGGATCTTTTCCTGAGAACTTTACTTTTAAGACAATAGACATGAAGAAATTAACGATCTCTTATCCGTGTGTAATGCTTAATGTTGATGTGGCTAAAAATAATACAAATGATCAATATCAGACTCTTGTAGATCCTGTACGCAAGACGTATGAGTCGCATAGTGAATGCTCCATTGAATTCGAAGTGGATGGACCGTACAAGGCAATGATAATTCCTGCATCGAAAGAAGAAGGAATCTTACTTAAGAAGCGGTATGCTGTTTTCAATCATGACGGAACCTTAGCAGAACTCAAGGGATTTGAGATCAAGCGTCGAGGGGAGCTGAAGCTCATTAAAGTTTTCCAGGCCGAACTTTTTGACAAATTTCTCCATGGGTCAACTCTTGAAGAGTGTTATTCTGCTGTTGCAGCCGTTGCAAATCGGTGGCTTGACCTGCTCGATAATCAAGGAAAAGATATTGCCGACAGTGAACTACTAGATTATATATCAGAATCAAGCACCATGAGCAAATCCTTAGCAGATTATGGTGAGCAAAAGTCATGTGCAGTGACCACAGCAAAACGCCTGGCTGATTTTCTTGGTGATACAATGGTCAAAGATAAAGGACTGCGTTGCCAATACATTGTTGCTTGTGAACCAAAGGGGTCACCTGTAAGTGAACGTGCTGTCCCTGTTGCCATATTTACCTTATCTAAGACGGAACCTGAAAGAATGAAATTTTATCTGGGAAAATGGTGCAAGCAGCGCCTTAGTTCAGACCATAAAGTTGATATTCGTTTAATTATTGACTGGTCGTATTACAAGCAGCGTCTTAATTCAGCTATCCAAAAAGTTATCACCATTCCCGCTGCAATGCAGAAGGTGGCAAATCCCGTACCTAGGGTGCTTCATCCTGATTGGCTTCATAAAAAAGTCCGTGAGAAAGATGATAAATTTCGCCAGAGAAAACTAGCTGATATGTTCAGCTCAGCAAACATAGATGGCGTGTTTGACAAAAATCATTCGGTGGCTCAAGATGATGTGAACGATATTGAGGATTTTTGCAAAGAAAACAAGCCTGGCGTAAAGGAGCCAAAGCCAATTGCACGTTCTTATGAAGTTAATAAAGAACAGGTTGGACGTGAGCAGCAAGAGAGCAAGGATCCAAAGTGCGATGACGATATTTCATTTGAGAACATTGACAAGAACGTGGATTACCAAGGTTGGCTTGAAGTGAGAAAAAGAAAATGGAAAGGAATTATGGAGAAGAAGAAGAAACGAAGGTTGGGTGATCAACGATCTTTAAAGCAGATTGATGCTCATGAGATAAAGAAAAAAGTCTCACAGGTTAGAAGAGGTGTAGGTTCATTCTTTAGGAGGCCTGAAGAAGCTTTGACTAGCTCACATTGGCAGATAATACAGCTGGTCCCAAGTCCACAGAGTGGACAATTTTTCGCTTGGGTGGTTGTGGAAGGATTGATGCTTAAAATACCATTGACGATCCCAAGAGTGTTTTACATTAATTCCAAAGCTCCTATAGATGGAAAATTCCCGGGAAAGTGTGTCAACAAGATTCTTCCTCATGGAAGGCCTTGTTATAATATGATTGAGGTTGAAATTCAGGAAGAACAATTTAGAAAAGAAAGCAAGAAGCTTGCAGCTCTTCTTGCAGACCCTGAAATTGAGGGCATATATGAAACAAAGGTGCCGCTGGAGTTTAGTGCTATATGTCAGATTGGATGTGTATGCAAAATTGATAACACAGCCAAGCACCGTAACACGCAAGATGGATGGAAAGTTGGTGAACTTCATATGAAAACTACAACGGAATGCCGCTACTTGGAGCGATCAATTCCACTTCTTTACTTGTATAACAGCACCTCAACACTACGTGCTATATATGTTTTATATTGTCATGCATCGAAGCTTATGTCTGCCGTGGTAGTTAATCCTTATGGCGACAAGGAGTTATTACCATCCGCCCTAGAGAGACAGTTTAGAGATGGTTGCCAAGAATTGTCACTCGAGTCGTTGTCTTGGGATGGTATCGTTTTCCAGGTAGACTATGTTGACCATGCCGAAGCTGCCGAAAAGATTATACAAAAAGCGATAAGTGAATACAGAGAAGAAAATTCTGGACCAACTGTTGCAGTCATTGAATGCCCTGACTTTAATTCCATCAAGGAGAGTATAAAAGCCCTGGATGATTTCCCATGTGTGAGGATTCCCTTCAACGGCGATGACAATAGTTATCAGCCTGTCTCCTGGCAACGTCCGGCAGCAAAATTAGCAGTGTTTCGTTGTGCGGCAGCATTTCAGTGGTTGGATCGGAGGATTTCTCAGTCAAGATATGCCCATGTGCCTTTGGGGAATTTTGGACTAGATTGGTTAACATTCACAATAGACATTTTCCTGTCCAGGGCACTCCGTGACCAACAGCAGGTTCTTTGGGTGTCAGATAATGGTGTTCCAGACCTTGGTGGTCTAAGCAATGAAGAGACATTCTTTGCTGATGAGGTGCAACAGACAAGTTTGGTATATCCTGGAGCGTATAGAAAAGTTTCTGTGGAATTAAAGATCCATCACTTGGCTGTTAATGCCCTTCTGAAAAGCAACCTGGTGAGTGAGATGGAAGGAGGTGACTTTTTGGGATTTGAACAGGATGGGAATTCCAGAGGAAGTAGTTCGAATGTTAACGCCAGTTTTGATGAGACCACTGGATGTGCTCCAGCATTTCGAGTCCTGAAACAGTTGATTCACAGTTGCTTGACTGATGTGTGTAAATCACGCAATATATATGCTGATTCCATTTTGCAACGTTTGTCTTGGTGGCTCTGCAGCCCTTGCTCGAAGCTTCATGATCCAGCTCTTCATCTCATGCTTCACAAGGTCATGCAAAAGGTGTTTGCGCTGCTTTTGACTGATTTGCGGAGATTAGGTGCTACAATAATATTTGCAGACTTCTCAAAGATCGTCATCGACACAGGGAAATTTGATCTATCTGCTGCTAATGCTTATTGTGACAGCTTAATCACAGCTGTGGGGAATAGCGATATCTTTGAGTGGATCTCGCTCGAACCGGTTCACTACTGGCACTCATTACTTTTCATGGACCAGTATAACTACGCTGGTATCCGAGCTACTGACGATGAAATTTCACCTGACGAAGTGACTATTGAACCAAAGTGGAGTGTTGCTCGACTTTTCCCTGAGTATATTCAGAGGGATTTCATCATAATTGTTGCCAAGTTTATATTTGACCCCTGGAAATTCGCTTTAGAGAAAAAAAGAGGCAGTTCAGAGAGTTTAGAGGCACAGATGGTAGAATATCTAAAGAAACAGATACCATCGAGCTATATGGATATGCTTGTTACAAAAATCAATGATATCACGTCACACATGAAGGAGATAGACTTTTCAGATACATCTCGAGATTCTAGTCAAGCTCCCAAAAGAGATTACACGTTAGAGTTCGTACAAACTATCTGTGCTGTTATGGCTCTTGACCAAAATGTCGAGCAAGATGTTCTGGTACTGAAAAGGAATCTGTTAAAGTACATTAACGTAAAAGAATTTGCGGCTGAAGCCGAATTTCTTGACCCTGGGCCCTCCTTTATCTTGCCTAATGTGGCTTGCAGCAACTGTGACGCCTACAGAGACCTAGATATAGGCAGAGACCCAGTTCTATTAACAGAGAAAGAATGGTGCTGCGTAGATTCACAATGTGGGAAGATATATGACAGAGAGCAGATGGAGAATAGTCTTCTCCAGATGGTGAGACAGAGAGAAAGAATGTACCACATGCAGGATCTAGTTTGCACGAGGTGCAATCAGGTGAAAGCGGCTCATTTGACAGAGCAGTGTGAGTGTTCTGGATCCTTTAGATGCAAGGAGAGCGGGTCTGAGTTCCGCAAGAGGATGGAGATTTTCTTGGATATAGCAAAGCGCCAGAAGTTTCAACTGTTGGAAGAATGCACATCTTGGATTATAGATCCCACCGGAAGCTGGCAAACCAATACCGGAAGACATCATTCATAG |
Protein: MSGDNRRWDRKDSRRSNKQKVVKTAEDELESKLGFGLFSEGETRLGWLLTFASSSWEDPDTGKTYSCVDLYFVTQDGFYFKTKYKFRPYFYAATKDKMELEVEAYLRRRYERQVADIEIVEKEDLDLKNHLSGLRKKYLKVSFDTVQQLMEVKRDLSHVVERNQAKFDALEAYESILAGKREQRLQDCLDSLVDLREYDVPYHVRFAVDKDVRSGQWYNVSISSTDVTLEKRTDILQRAEVRVCAFDIETTKLELKFPDAEYDQIMMISYMVDGQGFLIVNRECVGEDIEDLEYTPKPEFEGYFKVTNVSNEVELLRKWFSHMQEVKPGIYVTYNGDFFDWPFIERRAAHHEIKMNEELGFRCDQNQGECRAKFVCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVQFAMEKPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMVPDEVLRKGSGTLCEMLLMVEAYKANVVCPNKNQADPEKFYQSHLLESETYIGGHVECLESGVFRSDIPTSFKLDTSAYQQLIDNLDRDLEYAITVEGKMRMDSVSNYDEVKEKIKEKLEKLRDCPIREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTNEICTACDFNRPGKTCLRKLEWVWRGVTFMAKKSDYYHLKKQIESEFVDAGANIQSSKSFLDLPKVEQQSKLKERLKKYCQKAYRRVLDKPITEVREAGICMRENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNSIKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERIGRPLELDTDGIWCCLPGSFPENFTFKTIDMKKLTISYPCVMLNVDVAKNNTNDQYQTLVDPVRKTYESHSECSIEFEVDGPYKAMIIPASKEEGILLKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVACEPKGSPVSERAVPVAIFTLSKTEPERMKFYLGKWCKQRLSSDHKVDIRLIIDWSYYKQRLNSAIQKVITIPAAMQKVANPVPRVLHPDWLHKKVREKDDKFRQRKLADMFSSANIDGVFDKNHSVAQDDVNDIEDFCKENKPGVKEPKPIARSYEVNKEQVGREQQESKDPKCDDDISFENIDKNVDYQGWLEVRKRKWKGIMEKKKKRRLGDQRSLKQIDAHEIKKKVSQVRRGVGSFFRRPEEALTSSHWQIIQLVPSPQSGQFFAWVVVEGLMLKIPLTIPRVFYINSKAPIDGKFPGKCVNKILPHGRPCYNMIEVEIQEEQFRKESKKLAALLADPEIEGIYETKVPLEFSAICQIGCVCKIDNTAKHRNTQDGWKVGELHMKTTTECRYLERSIPLLYLYNSTSTLRAIYVLYCHASKLMSAVVVNPYGDKELLPSALERQFRDGCQELSLESLSWDGIVFQVDYVDHAEAAEKIIQKAISEYREENSGPTVAVIECPDFNSIKESIKALDDFPCVRIPFNGDDNSYQPVSWQRPAAKLAVFRCAAAFQWLDRRISQSRYAHVPLGNFGLDWLTFTIDIFLSRALRDQQQVLWVSDNGVPDLGGLSNEETFFADEVQQTSLVYPGAYRKVSVELKIHHLAVNALLKSNLVSEMEGGDFLGFEQDGNSRGSSSNVNASFDETTGCAPAFRVLKQLIHSCLTDVCKSRNIYADSILQRLSWWLCSPCSKLHDPALHLMLHKVMQKVFALLLTDLRRLGATIIFADFSKIVIDTGKFDLSAANAYCDSLITAVGNSDIFEWISLEPVHYWHSLLFMDQYNYAGIRATDDEISPDEVTIEPKWSVARLFPEYIQRDFIIIVAKFIFDPWKFALEKKRGSSESLEAQMVEYLKKQIPSSYMDMLVTKINDITSHMKEIDFSDTSRDSSQAPKRDYTLEFVQTICAVMALDQNVEQDVLVLKRNLLKYINVKEFAAEAEFLDPGPSFILPNVACSNCDAYRDLDIGRDPVLLTEKEWCCVDSQCGKIYDREQMENSLLQMVRQRERMYHMQDLVCTRCNQVKAAHLTEQCECSGSFRCKESGSEFRKRMEIFLDIAKRQKFQLLEECTSWIIDPTGSWQTNTGRHHS |